Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRNRGFGRRELLVAMAMLVSVTGCARHASGARPASTTLPAGADLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVLHQNPLTHLDKLITYTSDDIRSISPVAQQHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRAGGGYDAEPREALLAEAATCVAGVLA
3SOI Chain:A ((3-257))---------------------------------------------DDFAKLEEQFDAKLGIFALDTGTNRTVAYRPDERFAFASTIKALTVGVLLQQKSIEDLNQRITYTRDDLVNYNPITEKHVDTGMTLKELADASLRYSDNAAQNLILKQIGGP----ESLKKELRKIGDEVTNPERFEPELNEVNPGETQDTSTARALVTSLRAFALEDKLPSEKRELLIDFMKRNTTGDALIRAGVPDGFEVADKTGAASYGTRNDIAIIFPPKGDPVVLAVLSSRDKKD--AKYDDKLIAEATKVVMKAL-


General information:
TITO was launched using:
RESULT:

Template: 3SOI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138567 for 2384 contacts (-58.1/contact) +
2D Compatibility (PS) -27746 + (NN) -18459 + (LL) 2784
1D Compatibility (HY) -20400 + (ID) 5850
Total energy: -208238.0 ( -87.35 by residue)
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_3SOI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SOI-query.scw
PDB file : Tito_Scwrl_3SOI.pdb: