Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MSKQILVLPGDGIGPEIMAEAVKVLELANDRFQLGFELAEDVIGGAAIDK-HGVPLADQTLQRARQADAVLLGAVGGPKWDRIERDIRPERGLLKIRSQLGLFANLRPAILYPQLAAASSLKPEVVAGLDILIVRELTGGIYFGQPREQRVLENGERQAYDTLPYSESEIRRIARVGFDMARVRNN-RLCSVDKANVL-ASSQLWREVVEEVAKDYPDVELSHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFSQATAADAIEQAVSKVLDQG-LRTGDIWSEGCRKVGTREMGDAVVAALKNL------------------------------------------------------------------------------------------------------------------------------------------ |
| 2D1C Chain:A ((2-496)) | PLITTETGKKMHVLEDGRKLITVIPGDGIGPECVEATLKVLEAAK----APLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPVGYG------EKSANVTLRKLFETYANVRPVREFPNVPTPYAGR-----GIDLVVVRENVEDLYAGI---EHMQTPSVAQTLKLI--SWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANI-GNEVAIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLRY-LEEFATADLIENALLYTLEEGRVLTGDVVGYD-RGAKTTEYTEAIIQNLGKTPRKTQVRGYKPFRLPQVDGAIAPIVPRSRRVVGVDVFVETNLLPEALGKALEDLAAGTPFRLKMISNRGTQVYPPTGGLTDLVDHYRCRFLYTGEGEAKDPEILDLVSRVASRFRWMHLEKLQEFDGEPGFTKAQGED |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2D1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -177131 for 3023 contacts (-58.6/contact) +
2D Compatibility (PS) -36432 + (NN) -10521 + (LL) 1372
1D Compatibility (HY) -20400 + (ID) 5800
Total energy: -248912.0 ( -82.34 by residue)
QMean score : 0.533
|
|
|