Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQHRLAAAIALVGLVLSGCDSQTNVELKTPAQKASYGIGLNMGKSLSQEGMDDLDSKAVAKGIEDALGKKKQQLTDEELTEAFAFLQKRAEERMAAIGDENAKAGKKFLEENGKRDGVTTTASGLQYEIVKKADGPQ---PKATDVVTVHYEGRL-TDGTVFDSSIERGSPIDLPVSG--VIPGWVEALQLMHVGEKIKLYIPSELAYGAQSPSPAIPANSVLVFDMELLGIKDPSKPDAEPEAGAAAQPEAKADAKK |
4J4N Chain:A ((13-127)) | ------------------------------------------------------------------------------------------------------------------------TADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61658 for 781 contacts (-78.9/contact) +
2D Compatibility (PS) -11684 + (NN) -4206 + (LL) 8956
1D Compatibility (HY) -10400 + (ID) 2200
Total energy: -81192.0 ( -103.96 by residue)
QMean score : 0.541
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