Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
3F0G Chain:E ((24-178))
FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRH-----------DSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVV--
General information:
TITO was launched using:
RESULT:
Template:
3F0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120325 for 1226 contacts (-98.1/contact) +
2D Compatibility (PS) -15640 + (NN) -7890 + (LL) 264
1D Compatibility (HY) -14800 + (ID) 4300
Total energy: -162691.0 ( -132.70 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_3F0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0G-query.scw
PDB file :
Tito_Scwrl_3F0G.pdb
: