Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLENRVALVTGAGQGIGRAIAECFAAEGARVLLATRTASRGQAVLEAIRLGGGTAELLAVDLSEYDAARRAVSATLERFGQLDILLHNAAAFPQCALAELDEGTLERTLAVNLKSCFRLTQAALPALRRSVAGRVLVTSSVTGPRTAIPGLSHYAASKAGVNGFIRAAALELAGDGITVNGVEPGLVATPALGSLGDA--------AALAAHIPLGRVGQPLDIAHAMLFLASDEASYITGQTLVVDGGALLPENGGLA
4BMS Chain:K ((2-245))
-YRLLNKTAVITGGNSGIGLATAKRFVAEGAYVFIVGR---RRKELEQAAAEIGRNVTAVKADVTKLEDLDRLYAIVREQRGSIDVLFANSGAIEQKTLEEITPEHYDRTFDVNVRGLIFTVQKALPLLRD--GGSVILTSSVAGV-LGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVNAVSPGAIDTPIIENQVSTQEEADELRAKFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGIELFVDGG----------
General information:
TITO was launched using:
RESULT:
Template:
4BMS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153780 for 2019 contacts (-76.2/contact) +
2D Compatibility (PS) -26156 + (NN) -10706 + (LL) 996
1D Compatibility (HY) -14400 + (ID) 4600
Total energy: -208646.0 ( -103.34 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_4BMS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BMS-query.scw
PDB file :
Tito_Scwrl_4BMS.pdb
: