Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTALLA--GGHVLVEGVPGLGKTLLVRALARCFDG-----GFARIQFTPDLMPSDVTGHAVYDLASEQFKLRK-GPVFTHLLLADEINRAPAKTQAALLEVMQERQVTLEGRALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVANLRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGEFVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV |
| 2CHQ Chain:A ((6-176)) | -----------------------IWVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERGIDVVRHKIK-----EFARTAPIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-----------KSCRFILSCNYVS-----RIIEPIQSRCAV-FRFKPVPKEAMKKRLLEICEK------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CHQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85356 for 1189 contacts (-71.8/contact) +
2D Compatibility (PS) -17559 + (NN) -9781 + (LL) 11672
1D Compatibility (HY) -2800 + (ID) 1700
Total energy: -105524.0 ( -88.75 by residue)
QMean score : 0.434
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