Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATLFDPIVLGDLELPNRIVMAPLTRCRADEGRVPNALMAEYYAQRAD--AGLILSEATAVTPMGVGYPDT-PGIWSDDQVRGWSNVTKAVHAAGGRIFLQLWHVGRISDPLYLN--GELPVAPSAI-----AAEGHVSLVRPKRPYVTPRALDTEEIADIV-EAYRQGAERAKAAGFDGVEIHGANGYLLDQFLQDSTNKRTDRYGGSIENRARLLLEVTDAAISVWGAQRVGVHLAPRADSHDMG----DSNRLETFSHVARELGKR-----GIAFICAREAQADDSIGVA----------LKKAFGGPYIANEQFTLDSANAILAKGD-ADA---VAFGVPFIANPDLVERLRQGAELNPPRPETFYTGGTEGYLDYPTLA |
| 3UPW Chain:A ((15-381)) | ----FQSIKVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIWTDKHAKAWKVITDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNP------VRALTTQEVKDLVYEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDNEFVSKIWKGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSNPNLVWKLRDGIDLVPYDRNTFYSDNNYGY------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125704 for 2882 contacts (-43.6/contact) +
2D Compatibility (PS) -36193 + (NN) -20517 + (LL) 1364
1D Compatibility (HY) -23600 + (ID) 7000
Total energy: -211650.0 ( -73.44 by residue)
QMean score : 0.534
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