Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI
3TA0 Chain:D ((1-108))
MKMVVAVIRPEKLECVKKALEERGFVGMTVTEVKGRGE--------------VDLLQKTKVEVVVSDDAVDEVVEAIVSSARTGKFGDGRIFVIPVEKSVKIRTGDEE----
General information:
TITO was launched using:
RESULT:
Template:
3TA0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55938 for 599 contacts (-93.4/contact) +
2D Compatibility (PS) -10454 + (NN) -2115 + (LL) 1264
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -80093.0 ( -133.71 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3TA0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TA0-query.scw
PDB file :
Tito_Scwrl_3TA0.pdb
: