Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLQPVRLVSFVTTDLAGITRGRSLPLATLEEQL-ASGCGWVPANSSLTPQDLIDESSPWGSHGDLRLLPDPNSRVRVEQGPDAAAPALDYLHGNLVETDG-TPWPACPRSLLRAEVERYRDSGL--QVIAAFEHEFSLLGLPGE-------------------------------RP---AAAFSLQAQRAAGQFPGWLVSALAQAGTEPEMFLPEYG-QRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNREAALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLRALADVDPHGLSDEERQARGIQALPATLGDALDCLQRDE-ALC--AELPKPLLDTYLAMKRHELALTAGLSDDDLCRHYAELY |
| 1F52 Chain:A ((9-468)) | -LNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKG---------INESDMVLMPDASTAVIDPFFA----DSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKN-GTNLFSGDK-YAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVAS------PKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYDLPPEEA--KEIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1F52.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -193917 for 3540 contacts (-54.8/contact) +
2D Compatibility (PS) -44854 + (NN) -24940 + (LL) 1184
1D Compatibility (HY) -12000 + (ID) 5300
Total energy: -279827.0 ( -79.05 by residue)
QMean score : 0.432
|
|
|