Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEVVVVAAKRSAVGSFLGSLKNVGARQMGVSVLKDALN----ASSLKPSDVDSVILGNVLGAG-LGQNIARQIQLDAGIPNDRNAFSVNMVCGSSMKAIQLAHDSIVLGCDEVVVCGGVENMSAAPYLSFDMREGKRMG---NANMIDSMIHDGLWDA--FNDYHMGITADNVAQAYHISREDQDAFALQSQLKARAAINAGKFQEEITPIEIA--------NKKGVVVFKEDEYPRDTTLESLAKLKPAFKKDGSVTAGNSSGINDGASIIILCSAKKAQKLGLKTMATIKGFGLGGCSPDIMGICPSIAIKNNLKNIKMNLNDINLFELNEAFAAQSIAVLKELELNPNIVNVNGGAIAIGHPIGASGARILVTLLHEMKRSGHGVGCASLCVGGGQGLSVVVEQK |
| 4UBW Chain:A ((9-398)) | MGYPVIVEATRSPIGKRNGWLSGLHATELLGAVQKAVVDKAGIQSGLHAGDVEQVIGGCVTQFGEQSNNISRVAWLTAGLPEHVGATTVDCQCGSGQQANHLIAGLIAAGAIDVGIACGIEAMS-------------RVGLGANAGPDR------SWDIDLPNQFE---AAERIAKRRGITREDVDVFGLESQRRAQRAWAEGRFDREISPIQAPVLDEQNQPTGERRLVFR-DQGLRETTMAGLGELKPVLE-GGIHTAGTSSQISDGAAAVLWMDEAVARAHGLTPRARIVAQALVGAEPYYHLDGPVQSTAKVLEKAGMKIGDIDIVEINEAFASVVLSWARVHEPDMDRVNVNGGAIALGHPVGCTGSRLITTALHELERTDQSLALITMCAGGALSTGTIIERI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209967 for 3573 contacts (-58.8/contact) +
2D Compatibility (PS) -39489 + (NN) -13121 + (LL) 1336
1D Compatibility (HY) -12400 + (ID) 6600
Total energy: -280241.0 ( -78.43 by residue)
QMean score : 0.443
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