Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEILIAGGSGFLGKQIIKAALTK--GHKVAYLSRHEGKGDIFKDPRLTYIRGDITEADKIHLEDRTFDILIDCIGAIKPNQLDELNVKATQKAVALCHKNQIPKLVYISANSG---YSAYIKSKRKAEQIIKASGLDYLFVRPGLMYGEERPLSIFQAKCIKLFSHLPFLGIVVQKVFPTKVVIVAEAIVTTLRKKP-TQKILSIEELNNK
2JL1 Chain:A ((1-198))
FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYD---NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNE--GLRASTE--SGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPW
General information:
TITO was launched using:
RESULT:
Template:
2JL1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90571 for 1489 contacts (-60.8/contact) +
2D Compatibility (PS) -20830 + (NN) -12758 + (LL) 700
1D Compatibility (HY) -2400 + (ID) 1550
Total energy: -127409.0 ( -85.57 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_2JL1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JL1-query.scw
PDB file :
Tito_Scwrl_2JL1.pdb
: