Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNTKTLLPYKTMPVWTAQSIPKAFLEKHNTKEGTWAKLTILSGSLVFYQLSPDGEEISRHIFDASSDIPFVDPQVWHKVSPNSPDLSCYLTFYCQKEDYFHKKYGLTRTHSEVIASAPLLSEKSNILDLGCGQGRNSLYLSLLGHQVTSVDSNGQSLVALENMALEEELPYNIKRYDINTAAIEGHYDFILSTVVF-IF-LNPDCISDIILQMQSHTQIGGYNLIVSAMDTAENPC------------------------------------P--------LPFPFTFKEGQLKSYYN--DWEIIKYNENLGELHRVDENGNRLKLQFATLLARKLRS |
| 1Y8C Chain:A ((37-246)) | --------------------------------------------------------------------------------------------------------------------------VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKV-EK-----FTERITYLVKLGG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60396 for 1212 contacts (-49.8/contact) +
2D Compatibility (PS) -16871 + (NN) 669 + (LL) 7668
1D Compatibility (HY) -2800 + (ID) 1400
Total energy: -73130.0 ( -60.34 by residue)
QMean score : 0.357
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