Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNLLLLALPVLASRAYAAPAPGQALQRVGIVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPD----VKDLAALRVQLREQHLYY----QDQLLPVSRIIVHPQFYT-AQIGADIALLELEEPVNVSSHVHTVTLPPASET---FPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGN-----TRRDSCQGDSGGPLVCKV--NGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVPKKP |
3RM2 Chain:H ((1-255)) | ------------------------------IVEGSDAEIGMSPWQVMLFRKSP-QELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET---GQPSVLQVVNLPIVERPVCKDSTR---------IRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RM2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153416 for 1962 contacts (-78.2/contact) +
2D Compatibility (PS) -24893 + (NN) -8339 + (LL) 3288
1D Compatibility (HY) -19200 + (ID) 4300
Total energy: -206860.0 ( -105.43 by residue)
QMean score : 0.528
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