Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLLLLTLPLLSSLVHAAPSLAMPREGIVGGQEASGNKWPWQVSLRVND-TYWMHFCGGSLIHPQWVLTAAHCVGPNKADPNKLRVQLRKQYLYY---HDHLLTVSQIISHPDFYIAQD--GADIALLKLTNPVNITSNVHTVSLPPASETFPSGTLCWVTGWGNINNDVSLPPPFPLEEVQVPIVENRLCDLKYHKGLNTGDNVHIVRDDMLCAGN-EGHDSCQGDSGGPLVCKV-EDTWLQAGVVSWG--EGCAQPNRPGIYTRVTYYLDWIYRYVPKYF |
| 1BRU Chain:P ((1-239)) | ----------------------------VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCIS----SSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGA--SPDILQQGQLLVVDYATCSKPGWW-------GSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIA--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1BRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -173330 for 1942 contacts (-89.3/contact) +
2D Compatibility (PS) -25348 + (NN) -9622 + (LL) 2448
1D Compatibility (HY) -17200 + (ID) 4550
Total energy: -227602.0 ( -117.20 by residue)
QMean score : 0.372
|
|
|