Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQV-VAIKQVPVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDE--IATILKSTLKGLEYLHFMRKIHRDIKAGNILLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI--GYNCVADIWSLGITSIEMAEGKPPYADI-HPMRAIF---MIPTNPPPTFRKPELWSDDFTDFVKKCLVKNPEQRATATQLLQHPFIKNAKPVSILRDLITEAMEIKAKRHEEQQRELEEEEENSDEDELDSHTMVKTSVESVGTMRATSTMSEGAQTMIEHNSTMLESDLGTMVINSEDEEEEDGTMKRNATSPQVQRPSFMDYFDKQDFKNKSHENCNQNMHEPFPMSKNVFPDNWKVPQDGDFDFLKNLSLEELQMRLKALDPMMEREIEELRQRYTAKRQPILDAMDAKKRRQQNF |
2CLQ Chain:A ((30-283)) | --------------------------------LGKGTYGIVY-AGRDLSNQVRIAIKEIP-ERDSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG-----ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP----EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CLQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120733 for 1924 contacts (-62.8/contact) +
2D Compatibility (PS) -24956 + (NN) -11112 + (LL) 16948
1D Compatibility (HY) -17600 + (ID) 5050
Total energy: -162503.0 ( -84.46 by residue)
QMean score : 0.440
|
|
|