Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMLSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH-----WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV-----PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPLLLKRRKKARALEAAALAH
2JAM Chain:B ((15-289))-------------------------------------------------------------------EVLGSGAFSEVFLVKQRLTGKLFALKCIKKS-------SLENEIAVLKKIKHENIVTLEDIYES----TTHYYLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE----TESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSLQIQKNFAK--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -138942 for 1916 contacts (-72.5/contact) +
2D Compatibility (PS) -26931 + (NN) -11163 + (LL) 7388
1D Compatibility (HY) -24800 + (ID) 5250
Total energy: -199698.0 ( -104.23 by residue)
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_2JAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAM-query.scw
PDB file : Tito_Scwrl_2JAM.pdb: