Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVMQFQGLENPIQISPHCSCTPSGFFMEMMSMKPAKGVLTEQVAGPLGQNLEVEPYSQYSNVQFPQVQPQISSSSYYSNLGFYPQQPEEWYSPGIYELRRMPAETLYQGETEVAEMPVTKKPRMGASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVMDMYMRRKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQHADQTVNEDSEGRDLRQVTSTTKSCREKTELTPDQQTLLHFIMDSYNKQRMPQE-----ITNKILKEEFSAEENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIF----NKKLPSGHSDLLEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQKLC-KIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ |
| 4OZT Chain:E ((4-238)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISPEQEELIHRLVYFQNEYEQPSDEDLKRISNTPSEGEDQSDLNFRHITEITILTVQLIVEFAKRLPGFDKLLREDQIALLKACSSEVMMLRMARRYDVGSDSILFANNQPYTRDSYSLAGMG-ETVDDLLRFCRQMYGMKVDNAEYALLTAIVIFS-ERPSLIEGWKVEKIQEIYLEALKVYVDNRRKPASGTIFAKLLSVLTELRTLGNLNSEMCFSLKLKNKKLPPFLAEIWDV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OZT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127368 for 1693 contacts (-75.2/contact) +
2D Compatibility (PS) -24018 + (NN) -18636 + (LL) 15488
1D Compatibility (HY) -20400 + (ID) 4150
Total energy: -179084.0 ( -105.78 by residue)
QMean score : 0.567
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