Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSYDVIISGGGLLGLITAVGLSNNSVSVAVIEKNNLPRI-IDDNRAFAISQGSRKILEKLGIWQFIESEAEPI---LDICILDENSPITVHYNHKMVSEEPMGYVINSTVIWNAINNNFLNK-LNIYSLHSYRTITCDAGYVEVTL-----GNNQKLISSLLICAEGKNSKLPGLFSMSIIKFDYKQSSIVFNVKH----ELHHQNLAVEQFFPGGPFAILPMKSGYTSSIVWTEKSEISKMLMNLSEEEFIIELK--KRFGSYLGEVKLDGERKSYPLSFA-----SAKKLYKSRVLLIGDAAHSIHPVAGQGLNLGIRDAESVVRQITAAKAFGIDVGSSYLLKKISRDRCLDNFTMALATDGLNRIFSNRIFCAKTLRNFGLMA-----VENSKFLKKRFIRHAMGFV---------------------------------------- |
| 3E1T Chain:A ((5-503)) | PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGES---LLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEAIKDG-HEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTC-----------LAGEMSEQRCFEEFERRYRREYGNFYQFLVAFYDMNQDTDSYFWSARKIINTEERANEAFVRLIAGRSNLDEPVFQSNFMQGFTREITELQHLAMFGLVPSRDGLAWA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192799 for 3039 contacts (-63.4/contact) +
2D Compatibility (PS) -39255 + (NN) -3120 + (LL) 904
1D Compatibility (HY) -10000 + (ID) 3050
Total energy: -247320.0 ( -81.38 by residue)
QMean score : 0.369
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