Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK |
1SU5 Chain:B ((3-243)) | -RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDF----ARQKLDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQT-KAIADNVKDWSK-VVLAYEPVWAIGTGNPNTPQQAQEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPE-FVDII---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1SU5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -72444 for 2085 contacts (-34.7/contact) +
2D Compatibility (PS) -26107 + (NN) -12775 + (LL) 732
1D Compatibility (HY) -15200 + (ID) 5250
Total energy: -131044.0 ( -62.85 by residue)
QMean score : 0.594
|
|
|