Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFAVIGNPISHSLSPVMHRANFNSLGL----DDTYEALNIPIE-DFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAINAGAVNTVLIKDGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLNINQISLADAEKYLAEFDIVINTTPAGMAGNNESIIN----LKHLSPNTLMSDIVYIPYKTPILEEAERKGNHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE |
| 3PHH Chain:A ((4-257)) | KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSE---FLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLK-------YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDF-FQRLGCDCFM--EPPKSAFDLIINATSASLHNEL--PLNKEVLKGYFKEGKLAYDLAYGFL-TPFLSLAKELKTPFQDGKDMLIYQAALSFEKFSASQIPYSKAFE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109708 for 2141 contacts (-51.2/contact) +
2D Compatibility (PS) -25056 + (NN) -1369 + (LL) 1840
1D Compatibility (HY) -15600 + (ID) 3800
Total energy: -153693.0 ( -71.79 by residue)
QMean score : 0.351
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