Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPHDEMHRRVSEALKQVDMLERADYEPNA--------LSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTATEIFDHAEELTRIGLDLPFPIKINQMLGHQTSFLTYEGLVDQL |
4S0F Chain:B ((489-710)) | -------IEFRNVDFRYGLRKP-VLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRKKIAFVSQ--DVFIFSGTVKENLCLGNEN--VDMDEIIKAAKMANAH-DFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKKPDILILDQATSNLDSITENHIKDAIYGL--EDDVTVIIIAHRLSTIVNCDKIYLLKDGEIVESGSHTEL---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S0F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97897 for 1670 contacts (-58.6/contact) +
2D Compatibility (PS) -23605 + (NN) -10807 + (LL) 3536
1D Compatibility (HY) -18400 + (ID) 3900
Total energy: -151073.0 ( -90.46 by residue)
QMean score : 0.476
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