Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLNNYSLKVK--NKQLVDNCDLNFYLGQINHIVGKNGVGKSLLAKDF--LLNNSGNIPKSIS-----QNVTLISSSSNIPNDIT-----KDFLLSLLKSKFENNRQTFDKIYNILNIEAIPS----------NVLLKNLSDGQKQKLKLLSFLLEDHDLIILDEVTNALDKKTVNEIYEFLNDFIQSHQTKTIINITHNLSDLSALPGKYFIFKDLQIEEYQSKEEVINDYINL |
| 3GD7 Chain:A ((20-245)) | MTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSITLEQWRKAFGVIPQKVFIFSGTFRKNLDPNAA---HSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFA---DCTVILCEARIEAM-LECDQFLVIEENKVRQYDSILELYHYPA-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -82091 for 1483 contacts (-55.4/contact) +
2D Compatibility (PS) -21467 + (NN) -2704 + (LL) 504
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -117458.0 ( -79.20 by residue)
QMean score : 0.533
|
|
|