Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILTAMQDAIGRTPIFKFTRKDYPIPLKSAIYAKLEHLNPGGSVKDRLGQYLIKEAFRTRKITSTTTIIEPTAGNTGIALALVAIKHHLKTIFVVPKKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPL-QFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGMAKYLKERIPNIRLI--GVEPEGS-----ILNGGE--PGPHEIEGIGVEFIPPFFANLD---IDRFETISDEEGFSYTRKLAKKNGLLVGSSSGAAFAAALK-EVQRLPEGSQVLTIFPDMADRYLSKGIYS |
| 1FCJ Chain:C ((11-304)) | ---------IGHTPLVRLNRIG-----NGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIP---GNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGER-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71914 for 2500 contacts (-28.8/contact) +
2D Compatibility (PS) -31116 + (NN) -14736 + (LL) 1896
1D Compatibility (HY) -18000 + (ID) 5850
Total energy: -139720.0 ( -55.89 by residue)
QMean score : 0.540
|
|
|