Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLDHEKRRQLLNERHSCKMFDSHYEFSSTELEEIAEIARLSPSSYNTQPWHFVMVTNKDLKKQIAAHSYFNEEMIKSASALMVVCSLKPSELLPTSHYMQNLYPESYKVRVIPSFAQMLGVRFNHSMQKLESYILEQCYIAVGQICMGVSLMGLDSCIIGGF--DPLKVGEILEERINKPKIVCLIALGKRVAEASKKSRKSKVDAITWL
1ZCH Chain:A ((2-184))
------NEVIKSLTDHRSIRSYTD-EPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISELAG-GQPWIDQAPVFLLFCADFNRAKI----ALEDL----HD---FKME--------ITNGLESVLVGAVDAGIALGTATAAAESLGLGTVPIGAVRGNPQELIELLELPK-YVFPLSGLVIGHPADRSAKKPRLPQEAVNHQE
General information:
TITO was launched using:
RESULT:
Template:
1ZCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113432 for 1350 contacts (-84.0/contact) +
2D Compatibility (PS) -19238 + (NN) -4720 + (LL) 1984
1D Compatibility (HY) -1200 + (ID) 1700
Total energy: -138306.0 ( -102.45 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_1ZCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZCH-query.scw
PDB file :
Tito_Scwrl_1ZCH.pdb
: