Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKEYDVVILGGGTGGYVAAIQAAK-NGQKVAVVEKGK-------VGGTCLHRGCIPTKALLRSAEVLQTVK---KASEFGISVEGT-AGINFLQAQERKQAIVDQLEKGIHQLFKQ-GKIDLFVGTGTILGPS-----IFSPTAGTISVEFEDGSENEMLIPKNLIIATGSKPRTLSGLTIDEEH-----VLSSDGALNLETL--PKSIIIVGGGVIGMEWASMMHDFGVEVTVLEYADRILPTE-DKEVAKELARLYKKKKLNMHTSAEVQAASYKKTD-TGVEIKAIIKGE---EQTFTADKILVSVGRSANTENIGLQNTDIAT-ENGFIQVNDFYQTKESHIYAIGDCIPTI-QLAHVAMEEGTIAANYIAGKAAE---KLDYDLVPRCIYT-STEIASVGITEEQAKERGHEVKKGKFFFRGIGKALVYGESDG----FIKIIADKKTDDILGVSMIGPHVTDMISEAALAQVLNATPWEVGNT--IHPHPTLSESFREAALAVDGNAIHG-- |
| 3LAD Chain:A ((1-472)) | -SQKFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFK--LHGISTG--EVAIDVPTMIARKDQIVRNLTGGVASLIKANG-VTLFE-GHGKLL--AGKKVEVTAA----------DGSSQVLDTENVILASGSKPVEIPPAPVDQ--DVIVD---STGALDFQ--NVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-VDEQVAKEAQKILTKQGLKILLGARVTGTEVKN-KQVTVKFVDA----EGEKSQA-FDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRG-AMLAHKASEEGVVVAERIAG----HKAQMNYDLIPAVIYTH-PEIAGVGKTEQALKAEG----VAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPA--LSEALHEAALAVSG-HAIHVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260054 for 3610 contacts (-72.0/contact) +
2D Compatibility (PS) -46767 + (NN) -14298 + (LL) 2480
1D Compatibility (HY) -31600 + (ID) 8350
Total energy: -358589.0 ( -99.33 by residue)
QMean score : 0.536
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