Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLDKEIKYAFVTGASGEIGQAICMSLARAGWNLYLHYYQNKETVEKLLPLLQAEEVDVILIQADFDDLAS----LTEIEKQVFQLDAFIHAAGHAHYSLFQDTT--------DTNIAELWNVHMFMPMRLIRTFMPKLMKSSQGRIIFISSIWGEVGASMEVAYSTVKGAQIAFCRALSQEVGLSGITVNAVTPGVVETKMMDQFSEEEKDNLRQEIPLNRFAQPEEIAETVAFLTSKKASYITGEVLRLNGGWLM
4N5M Chain:A ((28-269))-----RIAYVTGGMGGIGTAICQRLAKDGFRVVAGCGPNSPRREKWLEQQKALGFDFIASEGNVADWDSTKTAFDKVKSEVGEVDVLINNAGITRDVVFRKMTRADWDAVIDTNLTSLFNV--------TKQVIDGMADRGWGRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMVKAIRQDVLDKIVATIPVKRLGLPEEIASICAWLSSEESGFSTGADFSLNGGLHM


General information:
TITO was launched using:
RESULT:

Template: 4N5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -189382 for 1915 contacts (-98.9/contact) +
2D Compatibility (PS) -24889 + (NN) -7907 + (LL) 1408
1D Compatibility (HY) -15200 + (ID) 4050
Total energy: -240020.0 ( -125.34 by residue)
QMean score : 0.596

(partial model without unconserved sides chains):
PDB file : Tito_4N5M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N5M-query.scw
PDB file : Tito_Scwrl_4N5M.pdb: