Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGRKTYESLGKALPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAETGEP-IYIVGGAEIYRLFMDVADQLIVTKIDAEFEADTAFPEVDWENFSEVAKEFHEKDEKNKYNYTFYTYERN
3TQ8 Chain:A ((2-160))
IITLIAAMDKNRLIGRNNELPWHLPADLAHFKSITLGKPIVMGRRTFDSIGKPLPHRRNIVITQQKNLIIEGCDIFYSLDDALS-ALTKEPEVIIIGGARIFKEALPKADKMILTIINHSFEGDVYFPEWNDKEWKITSQIKHERD--NPYPFQFLELRR-
General information:
TITO was launched using:
RESULT:
Template:
3TQ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93961 for 1173 contacts (-80.1/contact) +
2D Compatibility (PS) -17251 + (NN) -8215 + (LL) 264
1D Compatibility (HY) -13600 + (ID) 3150
Total energy: -135913.0 ( -115.87 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_3TQ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQ8-query.scw
PDB file :
Tito_Scwrl_3TQ8.pdb
: