Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEQREKLLEIHNLKQYFNKGTASEVRAVDDISFDIYKGETLGLVGESGCGKSTTGRTIIRLYDATGGEVIYNGKDVHARKSRKEMLEFRRKMQMIFQDPY----------ASLNPRMKVKDIIAEGIRIHGLAKTPEETNKQVYDLLETVGLSKEHAGRYPHEFSGGQRQRIGIARALAVQPEFIIADEPISALDVSIQAQVVNLLRQLQKEKNLTYLFIAHDLSMVKYISDRIGVMYFGKLVELAPANDLYHAPLHPYTESLLSAIPLPDPNYERTRVRKTYDPTSHNYKDGDEIKMREIAPGHFVYCSEEEEVMYKEKHAKLTAEAAAK |
1XEF Chain:A ((19-233)) | ----------------------------LDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPN----WLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAA-KLAGAHDFISEL-REGYNTI----VGEQGAG-----LSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGR--TVIIIAARLSTVKN-ADRIIVMEKGKIVEQGKHKELLSEPESLYS----------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -90709 for 1508 contacts (-60.2/contact) +
2D Compatibility (PS) -21501 + (NN) -76 + (LL) 8404
1D Compatibility (HY) -15200 + (ID) 3800
Total energy: -122882.0 ( -81.49 by residue)
QMean score : 0.442
|
|
|