Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENF--LTHAKEGY-YNGLSFHRVIKDFMIQSGD-PNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYLYNIRGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK |
| 1VDN Chain:A ((16-156)) | ------------------------------------------------------------------------------------GRVVFKLYNDIVPKTAENFRALCTGEKGFGYAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGK---------FPDENFKKHHDRPGLLSMANAGPNTNGSQFFITT-------------VP-----------CPWLDGKHVVFGEVVDGYDIVKKVESLG-SPSGATKARIVVAKSGEL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41374 for 1013 contacts (-40.8/contact) +
2D Compatibility (PS) -14691 + (NN) -7375 + (LL) 8376
1D Compatibility (HY) -10000 + (ID) 3250
Total energy: -68314.0 ( -67.44 by residue)
QMean score : 0.470
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