Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQVFQGRSFLAEKDFSREEFEYLIDFSAHLKDLKKRGVPHHYLEGKNIALLFEKTSTRTRAAFTTAAIDLGAHPEYLGAN------DIQLG------KKESTEDTAKVLGRMFDGIEFRGFSQ----------RMVEELAEFSGVPVWNGLTDEWHPTQMLADYLTIKENFGK--LEG----ITLVYCGDGRNN-VANSLLVAGTLMGVNVHIFSPKELFPAEE-IVKLAEEYAKESGAHVLVTDNVDEAVKGADVFYTDVWVSMGEEDKFKERVELLQPYQ-VNMELIKKANNDNLIFLHCLPAFHDTNTVYGKDVAEKFGVKEMEVTDEVFRSKYARHFDQAENRMHTIKAVMAATLGNLFIPKV |
| 3M5D Chain:A ((24-354)) | -------KHFLNTQDWSRAELDALLTQAA----LFKRNKLGSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFNLGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMETIT-HPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTNNGVFSHCLPL-----------------RRNVRATDAVMDSPNCIAIDEAENRLHVQKAIMAALV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107146 for 2536 contacts (-42.2/contact) +
2D Compatibility (PS) -32962 + (NN) -15971 + (LL) 2080
1D Compatibility (HY) -20400 + (ID) 5500
Total energy: -179899.0 ( -70.94 by residue)
QMean score : 0.584
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