Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVITDITELIGNTPLLRLKNFDVPEGVAVYAKLEMMNPGGSIKDRLGDMLIRDALDSGKVKPGGVIIEATAGNTGIGLALSARKYGLKAIFCVPEHFSREKQQIMQALGASIIHTPRQDGMQGAIQKAIQLETEIENSYCVL-QFKNRVNPSTYYKTLGPEMWEALDGNIHTFVAGAGSGGTFAGTASFLK--EKNPAVKTVIVEP-----VGSILNGGE--PHAHKTEGIGMEFIPDYMDKSHFDEIYTVTDENAFRLVKEAAEKEGLLIGSSSGAALYAALE-EAKKASAGTNIVTVFPDSSDRYISKQIYEGGI
1D6S Chain:A ((11-311))----------IGHTPLVRLNRIG---NGRILAKVESRNPSFSVACRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALF----


General information:
TITO was launched using:
RESULT:

Template: 1D6S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1765 -17238 -9.77 -59.44
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -9.77
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.589

(partial model without unconserved sides chains):
PDB file : Tito_1D6S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D6S-query.scw
PDB file : Tito_Scwrl_1D6S.pdb: