Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNPKKTVPTAFEFTDIAGIVKGASKGEGLG---NKFLSHIRQVDAICHVVRAFSDDNITHVSGKVDPIDDIETINLELILADMETVEKRITRVSKLAKQKDKDAVFEFEILSKLKEAFESEKPARSVEFTEEQQKLVKQLHLLTSKPILYVANVSEDEVADPSGNENVAKIREYAAGENAEVIVVCAKIESEIAELEGEEKQMFLEELGIQESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKKGMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKEYVVQDGDVIHFRFNV
2QTF Chain:A ((179-270))-IPSIGIVGYTNSGKTSLFNSLTGL-----------MSPKRYAIPINN-----------------RKIMLVDTVGFIRGIP--PQIVDAFFVTLSEAKYSDALILVIDSTFS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2QTF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 263 -46395 -176.41 -594.81
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -176.41
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_2QTF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QTF-query.scw
PDB file : Tito_Scwrl_2QTF.pdb: