Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSDDELTGLDEFALLAENAEQAGVNGPLPEVERVQAGAISALRWGGSAPRVIFLHGGGQNAHTWDTVIVGL--GEPALAVDLPGHGHSAWRED---GNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTA-EQRGTVA-LMHG-EREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDTR |
3QVM Chain:A ((25-277)) | ---------------------------------------------GGGEKTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASH-SSELI-GELSGSFCTTD-PIVA---KTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPNS-QLELIQAEGHCLHMTDAGLITPLLIHFIQN- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -116683 for 2090 contacts (-55.8/contact) +
2D Compatibility (PS) -26281 + (NN) -13694 + (LL) 3888
1D Compatibility (HY) -12400 + (ID) 1550
Total energy: -166720.0 ( -79.77 by residue)
QMean score : 0.420
|
|
|