Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKRRTQEERSAATREALITGARKLWGLRGYAEVGTPEIATEAGVTRGAMYHQFADKAALFRDVVEVVEQDVMARMATLVAASGAATPADAIRAAVDAWLEVS-GDPEVRQLILLDAPVVLGW-AGFRDVAQRYSLGMTEQLITEAIRAGQLAR-QPVRPLAQVLIGALDEAAMFIATADDP-KRARRETRQVLRRLIDGMLNG
5EYR Chain:A ((26-216))
-----------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWST-FMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIY--
General information:
TITO was launched using:
RESULT:
Template:
5EYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89067 for 1314 contacts (-67.8/contact) +
2D Compatibility (PS) -20522 + (NN) -11682 + (LL) 1200
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -128721.0 ( -97.96 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_5EYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5EYR-query.scw
PDB file :
Tito_Scwrl_5EYR.pdb
: