Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILDMFRLDDKVAVITGGGRGLGAAIALAFAQAGADVLIASRTSSELDAVAEQIRAAGRRAHTVAADLAHPEVTAQLAGQAVGAFGKLDIVVNNVGGTMPNTLLSTSTKDLADAFAFNVGTAHALTVAAVPLMLEHSGGGSVINISSTMGRLAARGFAAYGTAKAALAHYTRLAALDLCPR-VRVNAIAPGSILTSALEVVAAN----DELRAPMEQATPLRRLGDPVDIAAAAVYLASPAGSFLTGKTLEVDGGLTFPNLDLPIPDL
4BMS Chain:F ((1-247))----MYRLLNKTAVITGGNSGIGLATAKRFVAEGAYVFIVGRRRKELEQAAAEI---GRNVTAVKADVTKLEDLDRLYAIVREQRGSIDVLFANSGAIEQKTLEEITPEHYDRTFDVNVRGLIFTVQKALPLLRD---GGSVILTSSVAGVLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVNAVSPGAIDTPIIENQVSTQEEADELRAKFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGIELFVDGGLT-----------


General information:
TITO was launched using:
RESULT:

Template: 4BMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137106 for 2072 contacts (-66.2/contact) +
2D Compatibility (PS) -26292 + (NN) -8279 + (LL) 956
1D Compatibility (HY) -11600 + (ID) 4800
Total energy: -187121.0 ( -90.31 by residue)
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_4BMS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BMS-query.scw
PDB file : Tito_Scwrl_4BMS.pdb: