Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYD--RVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAGGPLP
2VFE Chain:B ((3-236))--RKYFVAANWKCN----GTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQS---KFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHSERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVD--LIDNFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGS------SSLIQQEDIDGFLVGNASL------------------


General information:
TITO was launched using:
RESULT:

Template: 2VFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113757 for 1799 contacts (-63.2/contact) +
2D Compatibility (PS) -25615 + (NN) -18196 + (LL) 1748
1D Compatibility (HY) -18800 + (ID) 4150
Total energy: -178770.0 ( -99.37 by residue)
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_2VFE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VFE-query.scw
PDB file : Tito_Scwrl_2VFE.pdb: