Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLPKPNNQTTVVITGASSGIGVELARGLAGRGFPLMLVARRR-ERLDELADQLRQEHCVGVEVLPLDLADTQARAQLADRLRSDAIAGL---CNSAGFGTSGRFWELPFARESEEVVLNALALMELTHAALPGMVKRGAGAVLNIASIAGFQPIPYMAVYSATKAFVLTFSEAVQEELHGTGVSVTALCPGPVPTEWAEIASAERFSIPLAQVSPHDVAEAAIAGMLSGKRTVVPGIVPKFVSTSGRFAPRSLLLPAIRIGNRLRGGPSR |
| 3VDR Chain:D ((8-190)) | ------------VVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADLSDAQATRDFIAK-AAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRT--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113323 for 1443 contacts (-78.5/contact) +
2D Compatibility (PS) -19419 + (NN) -7180 + (LL) 5252
1D Compatibility (HY) -9200 + (ID) 2900
Total energy: -146770.0 ( -101.71 by residue)
QMean score : 0.539
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