Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDLITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAGLLGTPIGHPAAIALADDAPIITPINSEFGKA--NRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTENLWALHTNRYDYVTTK-PLTAAQRAFRQVFEKPDFRTEHPVVRVHPETGERTL-LAGDFVRSFVGLDSHESRVLFEVLQRRITMPENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVISGAPMEIAG |
| 1GY9 Chain:A ((4-282)) | ---RLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQA-ITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKP---FYRA------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107482 for 2256 contacts (-47.6/contact) +
2D Compatibility (PS) -29990 + (NN) -15127 + (LL) 1372
1D Compatibility (HY) -12000 + (ID) 5150
Total energy: -168377.0 ( -74.64 by residue)
QMean score : 0.416
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