Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSGIQQNTLMDNDPLAHGYYVADLLVALAVVVLMLRA-RRTRPELARMLLLGTLIGLVWELPVFGLSAWTNTPIIEWATPLPLPTVVFLLAHSVWDGPLLTMGWLLARALTGEPAGALGLT-VQVLW-GQLTALAVELSAILAGTWSYVDDLWFNPVMFWFRGHPVTAAMQLTWLLAPLCFAALVRRLALTAR
2GLZ Chain:A ((4-152))
-----VEKTPWELVIDFHGHTCPDIALGYRIAQLAQREMGIRPAPDSECLVKAY------------------------TQSCALDAIQVLNKATIGRHALIIEE--------------THRYMYQFHFTGTQDIHQFTVSPAVLDHLETLRHP--DLSPRERQNKVLEGVQYVLTLEESAFCHYDKIPGQLSKI
General information:
TITO was launched using:
RESULT:
Template:
2GLZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136146 for 1043 contacts (-130.5/contact) +
2D Compatibility (PS) -15005 + (NN) -86 + (LL) 3732
1D Compatibility (HY) 1200 + (ID) 750
Total energy: -147055.0 ( -140.99 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_2GLZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GLZ-query.scw
PDB file :
Tito_Scwrl_2GLZ.pdb
: