Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIA-QR-AHGLPSAAQQKVLDRIDELRRAEGIDA
1B0N Chain:A ((2-108))
----IGQRIKQYRKE------KGYSLSELAEKA-----GVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHET-----L--D-----SEWEKLVRDAMTSGVSKKQFREFLDYQKWRKSQ-----
General information:
TITO was launched using:
RESULT:
Template:
1B0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48150 for 587 contacts (-82.0/contact) +
2D Compatibility (PS) -11075 + (NN) -5596 + (LL) 1712
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -68209.0 ( -116.20 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_1B0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0N-query.scw
PDB file :
Tito_Scwrl_1B0N.pdb
: