Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDAVPAGNFVPPLILHSDHGGSAMSSSAHRGRILHFLGDPAKLGDKAWEYFEDGLLWIEHGHVRALDHATYLLPQLPADLPLEEHPQRLLLPGFVDCHVHYPQLGVIASY-GTQLLDWLETHTFPAEQRFADAGYAAAQAELFLDELLRHGTTTALVFGTVHAVSAEAFFQAAQKRRLRMIAGKVLMDRNAPPALCDTAASGYAESRALIERWHG-NGRLQYAVTPRFAPTSSPEQLAAAARLLDEYPGVYLHTHLSENLKEVAWVGELFPQAQDYLDVYHRAGLVGERSVFAHGIHLSERECRCLAHKNAALAHCPSSNLFIGSGLFDLGRAQQYGIRVGIGSDVGGG-TSLSLLANLADAYKIQQLR-GTSLDPFQALYLATLGGARALDLDGLVGNFLPGREADFVALDLAATPMIAQRMEHARGLADTLFVLNTLGDDRAVAETWVMGERRHVKG |
| 1P1M Chain:A ((2-382)) | ---------------------------IIGNCLILKD----------FSSEPFWGAVEIENGTIKRVLQGE--------VKVDLDLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDRL-TEKMAYYGTILAQMEMARHGIAGFVDMYFH----EEWIAKAVRDFGMRALLTRGLVDSNGDD------GGRLEENLKLYNEWNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSL-NAPVTIHLYETSKEE-YD----------LEDILNIGLKEVKTIAAHCVHLPERYFGVLKDIPFFVSHNPASNLKLGNGIAPVQRMIEHGMKVTLGTDGAASNNSLNLFFEMRLASLLQKAQNPRNLDVNTCLKMVTYDGAQAMGFK--SGKIEEGWNADLVVIDLDLPEMFPV--------QNIKNHLVHA-FSGEVFATMVAGKWIYFDG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243498 for 3461 contacts (-70.4/contact) +
2D Compatibility (PS) -40654 + (NN) -18708 + (LL) 3272
1D Compatibility (HY) -11600 + (ID) 4550
Total energy: -315738.0 ( -91.23 by residue)
QMean score : 0.469
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