Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNLLLSPLAVGNLALRNRIVMAPMTRSRAQQPGDVPTALNALYYAQRAGA--GLIVSEGTQISHLGQGYAYTPGIYSEAQLAGWRQVTEAVHAAGGLIAAQLWHVGRMSHRSLQAGGEAPIAPS--PIQAKAQVFIADGQGGGSMAPADAPREMTLEDIRRVRDEFVRAARNALDAGFDLVELHGANGYLIDQFLASASNRRSDAYGGSLENRARFLLEIVDALVAAVGAERVGLRLSPWGTINDMHD-DEPEAMTLYLAEALQRRGIAYLHLAEWEW-SGGPAYPQGFRERLRERF--RAPLIVCGNYDAERAEAILQAGLAD-----AVAIGRPFIANPDLVERIRLGAPLAEANQARFYGG-DAAGYTDYPTLGQSATA |
| 4QNW Chain:A ((10-363)) | ----LFKPLKVGRCHLQHRMIMAPTTRFRADGQG-VPLPFVQEYYGQRASVPGTLLITEATDITPKAMGYKHVPGIWSEPQREAWREIVSRVHSKKCFIFCQLWATGRAADPDVLADMKDLISSSAVPVEEKGPL----------------PRALTEDEIQQCIADFAQAARNAINAGFDGVEIHGANGYLIDQFTQKSCNHRQDRWGGSIENRARFAVEVTRAVIEAVGADRVGVKLSPYSQYLGMGTMDELVPQFEYLIAQMRRLDVAYLHLANSRWLDEEKPHPDPNHEVFVRVWGQSSPILLAGGYDAASAEKVTEQMAAATYTNVAIAFGRYFISTPDLPFRVMAGIQLQKYDRASFYSTLSREGYLDYP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199510 for 2998 contacts (-66.5/contact) +
2D Compatibility (PS) -37776 + (NN) -22965 + (LL) 920
1D Compatibility (HY) -24000 + (ID) 7150
Total energy: -290481.0 ( -96.89 by residue)
QMean score : 0.465
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