Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRSPLFS-----QFPLHERLLKALESLSFSEPTPVQAAAIPKALE--GHDLRVTAQTGSGKTAAFLLPLLHRLLAEDKPRSLARALILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRK----NPEIIIGTPGRLLEQRNAGNLPLQD---IEVLVLDEADRML-DMGFADDVLALANACPAERQTLLFSATHSGAGLNKVIAEVLREPQVLRLNQVGELNENVRQQVITADDVAHKEQLLQWLLSNETYTKAIVFTNTRVSADRLTGRLIANQHKVFVLHGEKDQKDRKLAIERLKQGAVKILVATDVAARGLDVEGLDLVINFDMPRSGDEYVHRIGRTGRAGAEGLAISLICHGDWNLMSSVERYLKQNFERRNIKELKAAYQGPKKLKASGKAAGSKKKKQDRKGAAAKPAAKRKPAARPKAGPSAVVSADGMAPLKRKKPTAE |
| 3FMO Chain:B ((84-297)) | -PNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANK---YPQCLCLSPTYELALQTGKVIEQMGKF-YPELKLA-----YAVRGNKLERGQKISEQIVIGTPGTVLDW--CSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDS-VWKFAQKVVPDPNVIKL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142687 for 1605 contacts (-88.9/contact) +
2D Compatibility (PS) -21691 + (NN) -12167 + (LL) 15588
1D Compatibility (HY) -19200 + (ID) 3750
Total energy: -183907.0 ( -114.58 by residue)
QMean score : 0.670
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