Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEADYLVIGAGIAGASTGYWLSAHG-R-VVVLEREAQPG-YHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEHPLLSPRPEMVVDFSDD-PEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVD-GAWEVRCDAGSYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPKRRSAFIFAPPPGID-------CHDWPMLVSLDESFYLKPDA-GMLLGSPANAD------------PVE------AHD--VQPEQLDIATGMYLIEEATTLTIRRPEHTWAGLRSFVADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIRHQPLPAHLREHGLDEAMLSPRRLSP |
| 1PJ5 Chain:A ((4-390)) | --TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTEDG--VSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADGVIPADIVVSCAGFWGAKIGAMIGM-AVPLLPLAHQYVKTTPVPAQQGRNDQPNGARLPILRHQDQDLYYREHGDRYGIGSYAHRPMPVDVDTLGAYAPETVSEHHMPSRLDFTLEDFLPAWE-ATKQLLPALADSEIEDGFNGIFSFTPDGGPLLGESKELDGFYVAEAV---WVTHSAGVAKAMAELLTTGRSETDLGECDI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PJ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179547 for 3091 contacts (-58.1/contact) +
2D Compatibility (PS) -37047 + (NN) -9167 + (LL) 1224
1D Compatibility (HY) -10400 + (ID) 3300
Total energy: -238237.0 ( -77.07 by residue)
QMean score : 0.442
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