Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHATSSDDFSLSSRVALVTGAGRGIGRGIALALARAGADVAVADLDPQVAEETAAAIRSLGRRS-LALGVDVSDGDSVRAMVERVATEFGRLDVAVNNAGVISIRKVAELSLADWDRVMNVNARGVFLCCQAELPLMQAQRWGRIVNLSSIAGKV-GLPDLAHYCASKFAVIGFSNALAKEVARDGVTVNALCPG-IVGTGMW-RGEDGLSGRWRQAGESEAQSWERHQASLLPQGEAQTVEDMGQLVVYLAC--APHVTGQAIAVDGGFSL
3RIH Chain:A ((37-281))
--------FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARS----------------IPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG---
General information:
TITO was launched using:
RESULT:
Template:
3RIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162809 for 2050 contacts (-79.4/contact) +
2D Compatibility (PS) -25654 + (NN) -8294 + (LL) 1724
1D Compatibility (HY) -15600 + (ID) 5100
Total energy: -215733.0 ( -105.24 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3RIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RIH-query.scw
PDB file :
Tito_Scwrl_3RIH.pdb
: