Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLQPVRLVSFVTTDLAGITRGRSLPLATLEEQ-LASGCGWVPANSSLTPQDLIDESSPWGSHGDLRLLPDPNSRVRVEQGPDAAAPALDYLHGNLVET-DGTPWPACPRSLLRAEVERYRDSGL--QVIAAFEHEFSLLGLPGE-------------------------------RP---AAAFSLQAQRAAGQFPGWLVSALAQAGTEPEMFLPEYGQ-RQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNREAALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLRALADVDPHGLSDEERQARGIQALPATLGDALDCLQRDE-ALC--AELPKPLLDTYLAMKRH-ELALTAGLSDDDLCRHYAELY |
| 3NG0 Chain:A ((12-473)) | -IQDENIKIIDLKFIDTPGIWQHCSFYYDQLDENSFTEGIPFDGSSIRGWKA---------INESDMCMVPDPNTATIDPFCK----EPTLSMICSIKEPRTGEWYNRDPRTIAAKAAEYLRGTGIADTVYFGPEAEFFLFDDIRFGQTENSSYYFADSVEGRWNTGREEEGGNLGYKPGYKQGYFPVAPTDTAQDIRTEMLLTMAAFGVPIEKHHHEVASGGQNELGIKFDKLVNSADNLMIYKYVIKNVAKKYGKTVTFMPKPIFNDNGSGMHVHQSLWKD-GQPLFAGDKY-AGFSQMGLWYIGGILKHAPALLAFTNPTTNSYKRLVPGFEAPVNLAYSQGNRSASVRIPLSGG-----NPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGIKNQIDPGEPLDVDI------EL--AKIPSTPGSLEAALEALEKDHEFLTGTGVFSPDFVESWIEYKLDNEVNPMRLRPHPYEFSLYYDC- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171412 for 3467 contacts (-49.4/contact) +
2D Compatibility (PS) -43696 + (NN) -22736 + (LL) 816
1D Compatibility (HY) -14400 + (ID) 5300
Total energy: -256728.0 ( -74.05 by residue)
QMean score : 0.437
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