Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKN---ADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSI--AWMFESCGRCEYCTTGRETLCRSVKNAGYT-----VDGAMAEQVIV-TADYAVKVPEKLDPAAASSITCAGVTTYKAVK--VSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAAENKVTPKVQLRKLEEINDIFEEMEKGTITGRMVIKF |
| 3JV7 Chain:A ((25-343)) | -----------------------PGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPW---GCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSG-AGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLDIHTETFTLDEGPAAYRRLREGSIRGRGVV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187395 for 2640 contacts (-71.0/contact) +
2D Compatibility (PS) -32447 + (NN) -1153 + (LL) 2940
1D Compatibility (HY) -18400 + (ID) 5200
Total energy: -241655.0 ( -91.54 by residue)
QMean score : 0.477
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