Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFYDEKKTYQRIEERLEVISSFNAHNEHKNLQDEFKGAGISRRDLLKWAGMMSVTLALPASFAPLTLKAVEVANRLPVIWLHMAECTGCSESLLRSADPTIDSIIFDYINLEYHETIMVASGFQAEKSLHDAIEKHKNNYILMVEGGIP--QGTEYFLTQG-PNAETGAEECRKVAQHAAAIFAIGTCSSFGGVQAAYPNPSNAQPLHKIIDKPVINVPGCPPSEKNIVGNVLYYLMFGTLPKLDAYNRPSWAYGNRIHDLCERRGHFDAGEIVEHFGDENAKKGFCLYKMGCKRPYTFNNCSKLRFNSHTSWPIGAGHGCIGCSEPNFWDTMSPFEEPLANRSIKTAFDGLGADKVADKVGTTLLSATAIGIAAHALLSKAIKNKE |
| 4UE2 Chain:A ((5-262)) | -------------------------------------------------------------------------HRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEG-KDGYYLVVEGGLPTIDGGQWGMVAGHPMIET----TKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEALGVKTINIPGCPPNPINFVGAVVHVLTKG-IPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFN-QVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153855 for 2170 contacts (-70.9/contact) +
2D Compatibility (PS) -26837 + (NN) -13547 + (LL) 9472
1D Compatibility (HY) -21600 + (ID) 6650
Total energy: -213017.0 ( -98.16 by residue)
QMean score : 0.408
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