Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEVVVVAAKRSAVGSFLGSLKNVGARQMGVSVLKDALN----ASSLKPSDVDSVILGNVLGAG-LGQNIARQIQLDAGIPNDRNAFSVNMVCGSSMKAIQLAHDSIVLGCDEVVVCGGVENMSAAPYLSFDMREGKRMG---NANMIDSMIHDGLWDA--FNDYHMGITADNVAQAYHISREDQDAFALQSQLKARAAINAGKFQEEITPIEIA--------NKKGVVVFKEDEYPRDTTLESLAKLKPAFKKDGSVTAGNSSGINDGASIIILCSAKKAQKLGLKTMATIKGFGLGGCSPDIMGICPSIAIKNNLKNIKMNLNDINLFELNEAFAAQSIAVLKELELNPNIVNVNGGAIAIGHPIGASGARILVTLLHEMKRSGHGVGCASLCVGGGQGLSVVVEQK |
| 4UBV Chain:B ((9-398)) | MGYPVIVEATRSPIGKRNGWLSGLHATELLGAVQKAVVDKAGIQSGLHAGDVEQVIGGCVTQFGEQSNNISRVAWLTAGLPEHVGATTVDCQ-GSGQQANHLIAGLIAAGAIDVGIACGIEAMS-------------RVGLGANAGPDRSLIRAQSWDIDLPNQFE---AAERIAKRRGITREDVDVFGLESQRRAQRAWAEGRFDREISPIQAPVLDEQNQPTGERRLVFR-DQGLRETTMAGLGELKPVLE-GGIHTAGTSSQISDGAAAVLWMDEAVARAHGLTPRARIVAQALVGAEPYYHLDGPVQSTAKVLEKAGMKIGDIDIVEINEAFASVVLSWARVHEPDMDRVNVNGGAIALGHPVGCTGSRLITTALHELERTDQSLALITMCAGGALSTGTIIERI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UBV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196236 for 3585 contacts (-54.7/contact) +
2D Compatibility (PS) -40371 + (NN) -15591 + (LL) 1212
1D Compatibility (HY) -12800 + (ID) 6650
Total energy: -270436.0 ( -75.44 by residue)
QMean score : 0.416
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