Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKYIKADRF-FYADH---VKENGYLEIKDNHFGKWIENIS---GQEEILDYSGYQIAPGLVDTHIHGFAGA--DV--------MD-----------CDSEG----ILRMSAGLLSTGVTSFLPTTLTSDT-KRLEEASKSVAAVAGKEQGAKIQGIYFEGPYFTEEYKGAQNPIYMR-NPNLEEFAQWQKAAK-----GLITKIALAPE------REGVEEFVSAITKQGVTVALGHSNGTYKEAKKAVKAGASVWVHAYNGMRGLTHREPGMVGAVYNLPNTYAELICDGHHVDPVACDILMTQKGHNHVALITDCMAAGGAPDGDYMLGELPVVVSNGTARLKDGGNLAGS-ILKLKDGLKNVVE--WG-----IATPEEAVRMASYVPAVSVGIDNVCGQIKEGYAADFIVLDKH----------L----------DLVATYLDGEKRWQS |
| 3HPA Chain:A ((30-451)) | -TLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQ-----RIGMRFH---ASRGAMS-------------EPDILRDTQRLIETYHDEGRYAMLRV-VVAPCSPFSVSRDLMRDAAVLAREYGVSLHT-HLAENVNDIAY------TPAEYAED-L--------GWVG--------HDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGI-------APVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRD-DIGALKPGMAADFAAFDLRQPLFAGALHDPVAALVFCAPSQTAYTVVNGKVVVRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119111 for 2934 contacts (-40.6/contact) +
2D Compatibility (PS) -34511 + (NN) -11835 + (LL) 2472
1D Compatibility (HY) -5200 + (ID) 3050
Total energy: -171235.0 ( -58.36 by residue)
QMean score : 0.423
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